yhaQ [2018-04-10 10:37:54]

similar to ABC transporter (ATP-binding protein)

locus: BSU09890

pI: 6.10

mw: 33.69 kDa

protein length: 298 aa

gene length: 894 bp

function: unknown

product: ABC transporter (ATP-binding protein)

essential: no

synonyms

Genomic Context

categories

• [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 1,062,591 → 1,063,487

The protein

[SW|Localization]

• membrane associated (via [protein|887036DE96BD6174EAC2E7201BEEDE99E45EDDF0|YhaP]) [Pubmed|10092453]

Expression and Regulation

Operons

• genes: [gene|C1FE13182E3E62EBC9650B02DAA0D574332A5F4D|yhaQ]-[gene|887036DE96BD6174EAC2E7201BEEDE99E45EDDF0|yhaP]
  description: [Pubmed|20817675]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675,18840696], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  regulation

  • repressed during logarithmic phase ([protein|search|AbrB]) [Pubmed|18840696]

Biological materials

Mutant

• MGNA-C044 (natA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2042 NBRP B. subtilis, Japan]
• BKE09890 (Δ[gene|C1FE13182E3E62EBC9650B02DAA0D574332A5F4D|yhaQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTGAATCTCCTCCTTCCC, downstream forward: _UP4_TTTATAGAAAAGGTGGGGGC
• BKK09890 (Δ[gene|C1FE13182E3E62EBC9650B02DAA0D574332A5F4D|yhaQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTGAATCTCCTCCTTCCC, downstream forward: _UP4_TTTATAGAAAAGGTGGGGGC

References

• 10092453,20817675